PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Seita.5G023900.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family G2-like
Protein Properties Length: 202aa    MW: 21533.7 Da    PI: 6.3656
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Seita.5G023900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like22.23.1e-0780103125
             G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                         kpr+ WtpeLH+ F++a + L G+e
  Seita.5G023900.1.p  80 KPRVIWTPELHNIFLKAYNAL-GEE 103
                         79*******************.554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-679106IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MAPEANGGVV NGGSSTICME AERNKKPRKR KKSGSSHSAA ETATSSSLPS AGDGNGGAGQ  60
QRRQLAGEGQ QQQQQLHRGK PRVIWTPELH NIFLKAYNAL GEESSVHEAN MRYEEAEIRM  120
EHLQMAAEGE EGQGRAAERG AAAEMAAKAE EGQVQAAEPR TAAAGSSSPP GSSSIREQYW  180
KIDDITDVSW DFCGIPWRKT G*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12430KKPRKRK
22731RKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLK3XSG51e-51K3XSG5_SETIT; Uncharacterized protein
STRINGSi004864m3e-51(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2096956